SRGD Gene ID 1205 BLASTp at NCBI n/a n/a  
OrganismsAt ,Vv ,Sb ,Pt ,Os ,Gm ,Zm
Gene count7
Cintron count12
Cintron classesU2 ,im ,absent ,em
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Os~LOC_Os08g30820.1
Zm~GRMZM2G118104_T01
Sb~Sb07g019840
At~AT4G29820.1
Gm~Glyma09g07670.1
Vv~GSVIVP00016513001
Pt~estExt_fgenesh4_pg.C_LG_VI0927
 ------------------------------------------------------------
----MRTAPPPPPPPPPFSRLLPLSSRFPRLAALYLCGALPLSYNPRAGSGEIRPNS---
------------------------------------------------------------
------------------------------------------------------------
------------------------------------------------------------
MRDIWVNMSNPSPLLPVHLGHITHIPSWTATSKVTQHSDIVLRHRPVCYFASPQRFFLSR
------------------------------------------------------------
Os~LOC_Os08g30820.1
Zm~GRMZM2G118104_T01
Sb~Sb07g019840
At~AT4G29820.1
Gm~Glyma09g07670.1
Vv~GSVIVP00016513001
Pt~estExt_fgenesh4_pg.C_LG_VI0927
 ------MGLEIMTDEAAAAPSPAAAAAR---------VEIYPLCRYYFGARDVAAGGAGA
------MGLEMVEVMSETVPTVVPAAARENG------VDIYPLSRYYFGARD--AAGVPR
------MGLEM-EVMSEAAAPTTAVVPAAAAREPGVDVDIYPLTRYYFGARD-AAAAVPR
------MGEEARALDMEEIS---DNTTRRNDVVHDLMVDLYPLSSYYFGSKE----ALRV
------MGEE----EEEEVSVTALHHPNSGNDDQSLEFDIYPLSSYYFGSKD----AVPS
LFSAFPQALSLIFRMNYEMGSSADGDRSSSGDSSNHVLDIYPLSCYYFGSKD----PLLL
------MGDH-------------SVTVTDNNNHQSTVIEIYPLGSYYFGSKD----PIAF
2: 66-66
AT4G29820.1 0 0 U2 ..
Os~LOC_Os08g30820.1
Zm~GRMZM2G118104_T01
Sb~Sb07g019840
At~AT4G29820.1
Gm~Glyma09g07670.1
Vv~GSVIVP00016513001
Pt~estExt_fgenesh4_pg.C_LG_VI0927
 GLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHPHVLLLQVRNSSFLLPGGRLRPGE
GLETAADRALRLKANFAAHGLRTSVHGVLLVELFDHPHVLLLQVRNSSFLLPGGRLRPGE
GLETAADRALRLKANFAARGLRTSVHGVLLVELFDHPHLLLLQVRNSSFLLPGGRLRPGE
KDEIISDRVIRLKSNYAAHGLRTCVEAVLLVELFKHPHVLLLQYRNSIFKLPGGRLRPGE
KDLTLVDRVLRMKSNYAASGIRTCVEAVLLVELFKHPHLLLLQIRNSIYKLPGGRLRPGE
KEETLADRILRMKSNYSRYGSRTCVVAVILVELFKHPHLLLLQVKNSFFKLPGGRLRPGE
RDETIADRVQRMKSNFSARGLRTSVQAVMLVELFKHPHLLLLQVRNAFFKLPGGRLRPGE
3: 133-133
LOC_Os08g30820.1 0 2 U2 GTACGCAC..GCAG
Sb07g019840 0 2 U2 GTGAGTGC..GCAG
Glyma09g07670.1 0 2 U2 GTTCGGTT..TTAG
GSVIVP00016513001 0 2 U2 GTCTCTTT..CCAG
estExt_fgenesh4_pg.C_LG_VI0927 0 2 U2 GTACTCTC..TCAG
4: 149-149
Sb07g019840 1 0 U2 GTACCTCC..GCAG
Glyma09g07670.1 1 0 U2 GTTCGTTG..TCAG
GSVIVP00016513001 1 0 U2 GTTAGCTC..TCAG
estExt_fgenesh4_pg.C_LG_VI0927 1 0 U2 GTTGGTTC..TCAG
Os~LOC_Os08g30820.1
Zm~GRMZM2G118104_T01
Sb~Sb07g019840
At~AT4G29820.1
Gm~Glyma09g07670.1
Vv~GSVIVP00016513001
Pt~estExt_fgenesh4_pg.C_LG_VI0927
 QDVQGLKRKLSTKLSVAGHQDDEDGDGDDEWQIGECIGMWWRSEFDAAPFPYLLPNARAP
EEVRGLKRKLSSKLSVV---DDVEAVEEEDWQIGQCIGMWWRSEFEAIPFPYMPPRFRAA
EEVQGLKRKLSSKLSFVDADDDQTIEEEDDWQIGECIGMWWRSEFEAIPFPYMPPSFRAP
SDIEGLKRKLASKLSVN------ENVGVSGYEVGECIGMWWRPNFETLMYPFLPPNIKHP
SDTDGLKRKLARKLSVN------EDGDGSEWEVGECLGMWWRPDFETLMYPFIPPNVKKP
SEINGLKRKLSRKLSVN------EDGDGSDWEVGECLGMWWRPDFETLLYPYLPPNVKNP
SDIDGLQRKLSRMLSVN------ED-ETDHWEVGDCLGMWWRSDFETLLYPYLPPNLKVP
5: 180-180
LOC_Os08g30820.1 1 1 U2 GTGCTCAT..TCAG
Sb07g019840 2 1 U2 GTAGGCGT..TCAG
Glyma09g07670.1 2 1 U2 GTATTAGA..CTAG
GSVIVP00016513001 2 1 U2 GTAAGTTA..TCAG
estExt_fgenesh4_pg.C_LG_VI0927 2 1 U2 GTAAATCT..TCAG
6: 211-211
LOC_Os08g30820.1 2 0 U2 GTAACTGG..ATAG
Sb07g019840 3 0 U2 GTAGGTAA..CTAG
Glyma09g07670.1 3 0 U2 GTATTAAA..TTAG
GSVIVP00016513001 3 0 U2 GTATGCAA..TTAG
estExt_fgenesh4_pg.C_LG_VI0927 3 0 U2 GTAATCAA..TTAG
Os~LOC_Os08g30820.1
Zm~GRMZM2G118104_T01
Sb~Sb07g019840
At~AT4G29820.1
Gm~Glyma09g07670.1
Vv~GSVIVP00016513001
Pt~estExt_fgenesh4_pg.C_LG_VI0927
 KECIKLFLIKLPVSRQFVVPRNMKLLAVPLSQIHDNAQVYGSIIAGIPNLLSKFSMNIIS
KECMKLFLIRLPMSRQFIVPRNMKLLAVPLSQIHGNAQVYGPIIAAIPSLLSKFSFNVIS
KECIKLFLVRLPMSRQFIVPRNMKLLAVPLSQVHGNAQVYGPIISGIPNLLSKFSFNVIS
KECTKLFLVRLPVHQQFVVPKNFKLLAVPLCQLHENEKTYGPIMSQIPKLLSKFSFNMME
KECTKVFLVKLPESRKFIVPKNMRVLAVPLCQVHENHKTYGQIISGVPQLLSKFSFNMIE
KECTKLFLVKLPPSRKFIVPKNLKLLAIPLCQLHENDKTYGPIIAGVPQLLSKFSFNIID
KECTKLYVVKLPASRKFIVPKNLKLLAVPLCQVHENHKTYGPVISGVPQLLSKFSFNINY
7: 240-240
LOC_Os08g30820.1 3 0 U2 GTAAAGAG..GAAG
Sb07g019840 4 0 U2 GTATAAAA..GAAG
Glyma09g07670.1 4 0 U2 GTACATAA..GTAG
GSVIVP00016513001 4 0 U2 GTAATTGA..TTAG
estExt_fgenesh4_pg.C_LG_VI0927 4 0 U2 GTAAGTAC..TCAG
8: 277-277
LOC_Os08g30820.1 4 0 U2 GTCAGTTT..GCAG
Sb07g019840 5 0 U2 GTATGTAT..GCAG
Glyma09g07670.1 5 0 U2 GTACAGAC..ACAG
GSVIVP00016513001 5 0 U2 GTACAGAA..GTAG
estExt_fgenesh4_pg.C_LG_VI0927 5 0 U2 GTATAACT..GTAG
Os~LOC_Os08g30820.1
Zm~GRMZM2G118104_T01
Sb~Sb07g019840
At~AT4G29820.1
Gm~Glyma09g07670.1
Vv~GSVIVP00016513001
Pt~estExt_fgenesh4_pg.C_LG_VI0927
 D
D
D
I
S
S
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