SRGD Gene ID 108 BLASTp at NCBI n/a n/a  
OrganismsGm ,Zm ,Sb ,Pt ,At ,Mt ,Vv ,Os ,Pp ,Lj
Gene count26
Cintron count8
Cintron classesU2 ,im ,em ,absent
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5' UTR introns
Cluster Intron #: Alignment Start-Stop
Gene ID, Intron #, Phase,Intron Type,Intron Seq
Pp~e_gw1.46.90.1
Pp~fgenesh1_pg.scaffold_181000018
Pp~e_gw1.288.28.1
Vv~GSVIVP00028009001
At~AT2G47640.1
At~AT3G62840.1
Pt~estExt_Genewise1_v1.C_LG_II0233
Pt~estExt_fgenesh4_kg.C_LG_XIV0024
Lj~chr4.CM0042.1540.nc
Gm~Glyma10g33010.1
Gm~Glyma20g34630.1
Gm~Glyma05g34410.1
Mt~AC153350_26.2
Vv~GSVIVP00030614001
Zm~GRMZM2G171372_T03
Sb~estExt_fgenesh1_kg.C_chr_60138
Zm~GRMZM2G166985_T02
Zm~GRMZM2G166985_T01
Zm~GRMZM2G166985_T03
Zm~GRMZM2G171372_T01
Zm~GRMZM2G171372_T02
Zm~GRMZM2G076399_T01
Zm~GRMZM2G076399_T03
Zm~GRMZM2G076399_T04
Os~LOC_Os05g24970.1
Os~LOC_Os05g24970.2
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MSPAKHALQQTRPDPARHDITNTSLSHCPKRSYLRIFPFSTEKKSNPSALCSISLAREND
---------MSKP-----------------------------------------------
---------MSKP-----------------------------------------------
---------MSRP-----------------------------------------------
---------MSRP-----------------------------------------------
------------------------------------------------------------
---------MSRP-----------------------------------------------
---------MSRP-----------------------------------------------
---------MSRP-----------------------------------------------
---------MSRP-----------------------------------------------
------------------------------------------------------------
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2: 9-9
AT2G47640.1 1 2 U2 GTATATCT..GCAG
AT3G62840.1 0 0 U2 ..
estExt_Genewise1_v1.C_LG_II0233 1 2 U2 GTAACTTC..GCAG
estExt_fgenesh4_kg.C_LG_XIV0024 1 2 U2 GTAACTTC..GCAG
Glyma10g33010.1 1 2 U2 GTATTGAT..CAAG
Glyma20g34630.1 1 2 U2 GTATTGAT..CAAG
Glyma05g34410.1 1 2 U2 GTATTGGT..CAAG
AC153350_26.2 0 0 U2 ..
Pp~e_gw1.46.90.1
Pp~fgenesh1_pg.scaffold_181000018
Pp~e_gw1.288.28.1
Vv~GSVIVP00028009001
At~AT2G47640.1
At~AT3G62840.1
Pt~estExt_Genewise1_v1.C_LG_II0233
Pt~estExt_fgenesh4_kg.C_LG_XIV0024
Lj~chr4.CM0042.1540.nc
Gm~Glyma10g33010.1
Gm~Glyma20g34630.1
Gm~Glyma05g34410.1
Mt~AC153350_26.2
Vv~GSVIVP00030614001
Zm~GRMZM2G171372_T03
Sb~estExt_fgenesh1_kg.C_chr_60138
Zm~GRMZM2G166985_T02
Zm~GRMZM2G166985_T01
Zm~GRMZM2G166985_T03
Zm~GRMZM2G171372_T01
Zm~GRMZM2G171372_T02
Zm~GRMZM2G076399_T01
Zm~GRMZM2G076399_T03
Zm~GRMZM2G076399_T04
Os~LOC_Os05g24970.1
Os~LOC_Os05g24970.2
------------QEKTEEEEFSTGPLSVLTMSVKNNTQVLINCRNNKKLLGRVKAFDRHC
------MEEDTE--KTEEEEFSTGPLSVLTMSVKNNTQVLINCRNNKKLLGRVKAFDRHC
------QE------KTEEEEFSTGPLSVLAMSVKNNTQVLINCRNNKKLLGRVKAFDRHC
PKLRLQMEDDA-TAKNEGEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHC
------MEEDTNQGKTEEEEFNTGPLSVLMMSVKNNTQVLINCRNNRKLLGRVRAFDRHC
------MEEDAPS-KNEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MEEDAPS-KNEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MEEDTT--KNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MEEDT-AGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MEEDA-AGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MEEDT-VGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MEEDA-VGKNEEEEFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MFLFQSA-KNEEEDFNTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MQE---AGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MADEN-AGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MADENQAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MADENEAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MADENEAGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MAEETNI-KKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MAEETNI-KKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MAEETNI-KKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
-----MAEEATQQGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
------MAEEATQGKKEEEEFSTGPLSVLMMSVKNNTQVLINCRNNKKLLGRVRAFDRHC
3: 62-62
GSVIVP00028009001 0 2 U2 GTAAGTAT..TCAG
4: 69-72
fgenesh1_pg.scaffold_181000018 0 0 U2 GTAAGTTT..GTAG
GSVIVP00028009001 1 0 U2 GTGAGTTC..ACAG
AT2G47640.1 2 0 U2 GTAAGCTT..TTAG
estExt_Genewise1_v1.C_LG_II0233 2 0 U2 GTATGTTA..ATAG
estExt_fgenesh4_kg.C_LG_XIV0024 2 0 U2 GTATGTTA..ACAG
chr4.CM0042.1540.nc 0 0 U2 GTAAGTTC..ACAG
Glyma10g33010.1 2 0 U2 GTAAGTTC..ACAG
Glyma20g34630.1 2 0 U2 GTAAGTTC..ACAG
Glyma05g34410.1 2 0 U2 GTAAGTTC..ACAG
estExt_fgenesh1_kg.C_chr_60138 1 0 U2 GTAAGTTC..ACAG
GRMZM2G076399_T01 1 0 U2 GTGAGCCG..ACAG
GRMZM2G076399_T03 0 0 U2 GTGAGCCG..ACAG
GRMZM2G076399_T04 1 0 U2 GTGAGCCG..ACAG
LOC_Os05g24970.1 0 0 U2 GTAAGCGG..CTAG
LOC_Os05g24970.2 0 0 U2 GTAAGCGG..GCAG
5: 97-97
e_gw1.46.90.1 0 0 U2 GTACGTGG..GCAG
fgenesh1_pg.scaffold_181000018 1 0 U2 GTTTGTGG..CTAG
GSVIVP00028009001 2 0 U2 GTAATTGA..TCAG
AT2G47640.1 3 0 U2 GTATAGAG..TCAG
estExt_Genewise1_v1.C_LG_II0233 3 0 U2 GTAATGTT..TCAG
estExt_fgenesh4_kg.C_LG_XIV0024 3 0 U2 GTAATGTT..TCAG
chr4.CM0042.1540.nc 1 0 U2 GTATGTTT..GTAG
Glyma10g33010.1 3 0 U2 GTGTGTTC..GCAG
Glyma20g34630.1 3 0 U2 GTATGTTC..GCAG
Glyma05g34410.1 3 0 U2 GTATGTTG..TCAG
GSVIVP00030614001 0 0 U2 GTAATTGT..ACAG
estExt_fgenesh1_kg.C_chr_60138 2 0 U2 GTATGCAA..TCAG
GRMZM2G076399_T01 2 0 U2 GTTGGCAG..TTAG
GRMZM2G076399_T03 1 0 U2 GTTGGCAG..TTAG
GRMZM2G076399_T04 2 0 U2 GTTGGCAG..TTAG
LOC_Os05g24970.1 1 0 U2 GTTGGTTG..CTAG
LOC_Os05g24970.2 1 0 U2 GTTGGTTG..CTAG
Pp~e_gw1.46.90.1
Pp~fgenesh1_pg.scaffold_181000018
Pp~e_gw1.288.28.1
Vv~GSVIVP00028009001
At~AT2G47640.1
At~AT3G62840.1
Pt~estExt_Genewise1_v1.C_LG_II0233
Pt~estExt_fgenesh4_kg.C_LG_XIV0024
Lj~chr4.CM0042.1540.nc
Gm~Glyma10g33010.1
Gm~Glyma20g34630.1
Gm~Glyma05g34410.1
Mt~AC153350_26.2
Vv~GSVIVP00030614001
Zm~GRMZM2G171372_T03
Sb~estExt_fgenesh1_kg.C_chr_60138
Zm~GRMZM2G166985_T02
Zm~GRMZM2G166985_T01
Zm~GRMZM2G166985_T03
Zm~GRMZM2G171372_T01
Zm~GRMZM2G171372_T02
Zm~GRMZM2G076399_T01
Zm~GRMZM2G076399_T03
Zm~GRMZM2G076399_T04
Os~LOC_Os05g24970.1
Os~LOC_Os05g24970.2
NMVLENVKEMWTEVPKAGKGKKKAKPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVKEMWTEVPKTGKGKKKAKPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVKEMWTEVPKTGKGKKKAKPVNKDRFISKMFLRGESVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKANPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKALPVNRDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKSQPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKAQPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKANPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPN
NMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEIPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
NMVLENVREMWTEVPKTGKGKKKALPVNKDRFISKMFLRGDSVIIVLRNPK
6: 132-132
e_gw1.46.90.1 1 0 U2 GTAACGGT..TCAG
fgenesh1_pg.scaffold_181000018 2 0 U2 GTGCTCCA..TTAG
GSVIVP00028009001 3 0 U2 GTTAGTTT..TCAG
AT2G47640.1 4 0 U2 GTAGCCAA..TTAG
estExt_Genewise1_v1.C_LG_II0233 4 0 U2 GTTGGTTA..TCAG
estExt_fgenesh4_kg.C_LG_XIV0024 4 0 U2 GTTGGTTA..TCAG
chr4.CM0042.1540.nc 2 0 U2 GTATTCTT..CCAG
Glyma10g33010.1 4 0 U2 GTATGGTT..TCAG
Glyma20g34630.1 4 0 U2 GTATGGTT..TCAG
Glyma05g34410.1 4 0 U2 GTATGGTT..TCAG
GSVIVP00030614001 1 0 U2 GTTGGGCT..GCAG
estExt_fgenesh1_kg.C_chr_60138 3 0 U2 GTAATGAA..CTAG
GRMZM2G076399_T01 3 0 U2 GTAGGCCG..ACAG
GRMZM2G076399_T03 2 0 U2 GTAGGCCG..ACAG
GRMZM2G076399_T04 3 0 U2 GTAGGCCG..ACAG
LOC_Os05g24970.1 2 0 U2 GTACATGG..GCAG
LOC_Os05g24970.2 2 0 U2 GTACATGG..GCAG


3' UTR introns